CEN

Forces, mechanisms and pathways involved in the ATR-mediated control of nuclear plasticity in response to mechanical stress

Funding Institution: CEN – Regione Lombardia, grant 2014
People: Prof. Riccardo Bertacco (Unit leader)
Partners: IFOM-Fondazione Istituto FIRC di oncologia Molecolare; Università degli Studi di Milano; Mechanobiology Institute and Department of Biological Sciences, NUS, Singapore (collaborator); Danish Cancer Society Research Center, Copenhagen, Denmark (collaborator)

In-vitro tests and analyses are of fundamental importance for investigating biological mechanisms in cells and bio-molecules. The controlled application of forces to activate specific bio-pathways and investigate their effects, mimicking the role of the cellular environment, is becoming a prominent approach in this field. Methods based on the remote manipulation of magnetic beads are receiving great attention because magnetic fields are not screened by biological or culture media and because they do not involve relevant energy dissipation, which could eventually damage the cell structure. In this project, magnetic domain wall tweezers [1] in combination with magnetic nanoparticles are exploited to apply controlled mechanical forces [2] to the cellular membrane. Mechanical forces owing from chromosome dynamics or plasma membrane stress convey to the nuclear envelope activating ATR. ATR is a PI3 kinase and is connect to the DNA damage response [3], protecting the integrity of replicating chromosomes, preventing fragile site expression and aberrant condensation events. ATR coordinates nuclear envelope plasticity with chromatin and cytoskeleton dynamics to counteract aberrant chromatin dynamics at the nuclear envelopment. ATR activation will be studied using quantitative approaches to assess the mechanical forces required. The project aims at: 1) implementing nanotechnology-based tools to measure apply controlled localized mechanical forces to the cell membrane and to internal cellular compartments to activate ATR; 2) characterizing mechanisms and factors in the ATR-mediated mechanical response; 3) studying how the ATR-mechanical response affects nuclear plasticity and cytoskeleton dynamics.

(a) Frames from a video showing the manipulation of a single MNP over a circular magnetic conduit with 10 μm diameter in proximity of a mammalian murine cell, induced by rotating in plane a magnetic field of 300 Oe;  (b) frames showing the stimulation of HeLa cells; the nucleus is green florescence, while actin is red fluorescence;  (c) Sketch of the potential energy well capturing a magnetic nanoparticle on top of a domain wall in a magnetic conduit; (d) experimental setup: 60x immersion objective and 4-pole electromagnets.

(a) Frames from a video showing the manipulation of a single MNP over a circular magnetic conduit with 10 μm diameter in proximity of a mammalian murine cell, induced by rotating in plane a magnetic field of 300 Oe; (b) frames showing the stimulation of HeLa cells; the nucleus is green florescence, while actin is red fluorescence; (c) Sketch of the potential energy well capturing a magnetic nanoparticle on top of a domain wall in a magnetic conduit; (d) experimental setup: 60x immersion objective and 4-pole electromagnets.

Publications

[1] [doi] M. Donolato, P. Vavassori, M. Gobbi, M. Deryabina, M. F. Hansen, V. Metlushko, B. Ilic, M. Cantoni, D. Petti, S. Brivio, and R. Bertacco, “On-Chip Manipulation of Protein-Coated Magnetic Beads via Domain-Wall Conduits,” Advanced Materials, vol. 22, iss. 24, p. 2706–2710, 2010.
[Bibtex]
@Article{ADMA:ADMA201000146,
Title = {On-Chip Manipulation of Protein-Coated Magnetic Beads via Domain-Wall Conduits},
Author = {Donolato, Marco and Vavassori, Paolo and Gobbi, Marco and Deryabina, Maria and Hansen, Mikkel F. and Metlushko, Vitali and Ilic, Bojan and Cantoni, Matteo and Petti, Daniela and Brivio, Stefano and Bertacco, Riccardo},
Journal = {Advanced Materials},
Year = {2010},
Number = {24},
Pages = {2706--2710},
Volume = {22},
Doi = {10.1002/adma.201000146},
ISSN = {1521-4095},
Keywords = {magnetic nanoparticles, bio-nanotechnology, magnetic materials, microstructures, microfluidics},
Publisher = {WILEY-VCH Verlag},
Url = {http://dx.doi.org/10.1002/adma.201000146}
}
[2] [doi] M. Monticelli, E. Albisetti, D. Petti, D. V. Conca, M. Falcone, P. P. Sharma, and R. Bertacco, “Towards an on-chip platform for the controlled application of forces via magnetic particles: A novel device for mechanobiology,” Journal of Applied Physics, vol. 117, iss. 17, 2015.
[Bibtex]
@Article{Monticelli2015,
Title = {Towards an on-chip platform for the controlled application of forces via magnetic particles: A novel device for mechanobiology},
Author = {Monticelli, M. and Albisetti, E. and Petti, D. and Conca, D. V. and Falcone, M. and Sharma, P. P. and Bertacco, R.},
Journal = {Journal of Applied Physics},
Year = {2015},
Number = {17},
Volume = {117},
Doi = {10.1063/1.4917191},
Eid = {17B317},
Url = {http://scitation.aip.org/content/aip/journal/jap/117/17/10.1063/1.4917191}
}
[3] [doi] A. Kumar, M. Mazzanti, M. Mistrik, M. Kosar, G. Beznoussenko, A. Mironov, M. Garrè, D. Parazzoli, G. V. Shivashankar, G. Scita, J. Bartek, and M. Foiani, “ATR Mediates a Checkpoint at the Nuclear Envelope in Response to Mechanical Stress,” Cell, vol. 158, iss. 3, p. 633–646.
[Bibtex]
@Article{Kumar,
Title = {ATR Mediates a Checkpoint at the Nuclear Envelope in Response to Mechanical Stress},
Author = {Kumar, Amit and Mazzanti, Michele and Mistrik, Martin and Kosar, Martin and Beznoussenko, Galina V. and Mironov, Alexandre A. and Garrè, Massimiliano and Parazzoli, Dario and Shivashankar, G.V. and Scita, Giorgio and Bartek, Jiri and Foiani, Marco},
Journal = {Cell},
Number = {3},
Pages = {633--646},
Volume = {158},
__markedentry = {[User:6]},
Booktitle = {Cell},
Comment = {doi: 10.1016/j.cell.2014.05.046},
Doi = {10.1016/j.cell.2014.05.046},
Owner = {User},
Publisher = {Elsevier},
Timestamp = {2015.07.02},
Url = {http://dx.doi.org/10.1016/j.cell.2014.05.046}
}